Oligopeptide transport ATP-binding protein OppD
SEED: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
KEGG: peptide/nickel transport system ATP-binding protein
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)
Or see all 337 experiments or choose conditions
| group | condition | fitness | t score | |
|---|
| mixed community | 0.1X LB plate, Mixed culture; Pseudomonas lini TBS_028 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -3.9 | -6.5 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 | -1.4 | -5.6 | compare |
| mixed community | 0.1X LB plate, 1:1 coculture with Paenibacillus lautus 004-C1 | -1.1 | -4.5 | compare |
| mixed community | M9 plate, 1:1 coculture with Paenibacillus favisporus 004-C2 | -1.0 | -3.3 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -1.0 | -4.1 | compare |
| supernatant | mutant library grown in Supernatant; Pseudomonas frederiksbergensis TBS_004 grown in LB | -1.0 | -6.2 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.8 | -2.3 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 | -0.8 | -4.9 | compare |
| mixed community | M9 plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.8 | -4.1 | compare |
| mixed community | TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090 | -0.8 | -2.9 | compare |
| mixed community | M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.8 | -3.1 | compare |
| mixed community | 1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.8 | -4.1 | compare |
| mixed community | 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040 | -0.7 | -2.3 | compare |
| supernatant | mutant library grown in Supernatant; Brevibacillus agri TBS_043 grown in LB | -0.7 | -4.6 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Streptomyces collinus SAI_078 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.6 | -2.9 | compare |
| carbon source | Itaconic Acid (C) | -0.6 | -2.3 | compare |
| mixed community | 1X LB plate, 1:1 coculture with Microbacterium atlanticum SAI_030 | -0.6 | -3.3 | compare |
| mixed community | TSB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.6 | -2.6 | compare |
| mixed community | M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2 | +0.8 | +1.8 | compare |
| mixed community | TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.9 | +2.6 | compare |