Cold shock-like protein CspD
SEED: Cold shock protein CspD
KEGG: cold shock protein (beta-ribbon, CspA family)
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.7)
Or see all 337 experiments or choose conditions
| group | condition | fitness | t score | |
|---|
| mixed community | 1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037 | -3.6 | -2.6 | compare |
| mixed community | 1X LB plate, 1:1 coculture with Promicromonospora thailandica SAI_039 | -2.2 | -3.0 | compare |
| carbon source | D-Lactate (C) | -2.2 | -3.0 | compare |
| mixed community | 0.1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031 | -2.2 | -3.8 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -2.2 | -1.9 | compare |
| mixed community | 0.1X LB plate, 1:1 coculture with Chryseobacterium gleum TBS_030 | -2.1 | -3.9 | compare |
| mixed community | AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001 | -2.1 | -2.3 | compare |
| mixed community | 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196 | -2.0 | -2.5 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Streptomyces collinus SAI_078 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -2.0 | -2.4 | compare |
| mixed community | M9 plate, 1:1 coculture with Bacillus megaterium TBS_037 | -1.9 | -3.2 | compare |
| mixed community | TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031 | -1.9 | -3.1 | compare |
| mixed community | M9 plate, 1:1 coculture with Promicromonospora sp. SAI_038 | -1.9 | -3.7 | compare |
| mixed community | 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_046 | -1.8 | -2.0 | compare |
| mixed community | 1X LB plate, 1:1 coculture with Burkholderia territorio SO8-2 | -1.7 | -2.4 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 | -1.7 | -3.1 | compare |
| carbon source | L-Glutamic (C) | -1.7 | -4.5 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -1.7 | -2.0 | compare |
| mixed community | 1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +2.2 | +6.8 | compare |
| nitrogen source | L-Histidine (N) | +3.5 | +1.2 | compare |
| mixed community | 1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +4.1 | +1.8 | compare |