Fitness data for LRK54_RS16640 in Rhodanobacter denitrificans FW104-10B01

tRNA pseudouridine(13) synthase TruD
SEED: tRNA pseudouridine 13 synthase (EC 4.2.1.-)
KEGG: tRNA pseudouridine synthase D

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -1.0 -2.3 compare
stress R2A_PIPES with Nickel (II) chloride 424 uM -1.0 -2.9 compare
r2a_control R2A control -0.9 -3.5 compare
phage 1E-T1 -0.8 -1.4 compare
biofilm assay; planktonic sample planktonic; Day2; NLDM; -0.8 -2.5 compare
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.7 -1.5 compare
phage 4B-T1 -0.6 -1.3 compare
pH R2A_PIPES pH 4.25 -0.6 -1.9 compare
stress R2A with nitrate 125 mM -0.6 -2.2 compare
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM -0.6 -2.0 compare
biofilm assay; planktonic sample planktonic; Day2; NLDM; -0.5 -2.3 compare
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.5 -1.5 compare
anaerobic Anaerobic, acetate donor; nitrate electron acceptor +0.5 +1.8 compare
stress R2A with beryllium sulfate tetrahydrate 1.953125 mM +0.5 +2.9 compare
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.6 +1.7 compare
carbon source a-Cyclodextrin 20 mM +0.8 +2.3 compare
stress R2A with Nickel (II) chloride 0.3125 mM +0.9 +1.5 compare
stress R2A with Cobalt chloride 0.15625 mM +0.9 +3.2 compare
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM +1.0 +4.5 compare
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM +1.1 +3.7 compare