Fitness data for JOY50_RS10425 in Pseudomonas sp. BP01

lpxO: lipid A hydroxylase LpxO
SEED: Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO
KEGG: beta-hydroxylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
supernatant control supernatant control, M9 with 0.1X LB -0.3 -1.4 compare
supernatant Supernatant; Pseudomonas DC3000 grown in LB; 0.3 X -0.3 -1.5 compare
mixed community Mixed culture; Pseudomonas DC3000 1:1 with Pseudomonas_SVBP6_ML3 in M9 -0.3 -1.2 compare
mixed community Mixed culture; Pseudomonas DC3000 1:1 with Pseudomonas_SVBP6_ML3 in LB -0.2 -0.9 compare
mixed community Mixed culture; Pseudomonas DC3000 2:1 with Pseudomonas_SVBP6_ML3 in M9 -0.2 -0.8 compare
supernatant Supernatant; Pseudomonas DC3000 grown in LB; 0.1 X -0.2 -0.9 compare
supernatant control supernatant control; LB -0.2 -0.6 compare
supernatant M9 with Supernatant; Pseudomonas DC3000 grown in LB 0.1X -0.2 -0.7 compare
supernatant M9 with Supernatant; Pseudomonas DC3000 grown in LB 0.25X +0.2 +0.8 compare
mixed community Mixed culture; Pseudomonas DC3000 2:1 with Pseudomonas_SVBP6_ML3 in M9 +0.2 +0.5 compare
mixed community Mixed culture; Pseudomonas DC3000 1:1 with Pseudomonas_SVBP6_ML3 in M9 +0.2 +0.8 compare
supernatant Supernatant; Pseudomonas DC3000 grown in LB; 0.4 X +0.2 +0.9 compare
supernatant control supernatant control; LB +0.2 +0.7 compare
mixed community control mixed community control; M9 +0.2 +0.8 compare
mixed community Mixed culture; Pseudomonas DC3000 10:1 with Pseudomonas_SVBP6_ML3 in M9 +0.2 +1.1 compare
mixed community Mixed culture; Pseudomonas DC3000 1:1 with Pseudomonas_SVBP6_ML3 in M9 +0.2 +1.1 compare
supernatant Supernatant; Pseudomonas DC3000 grown in LB; 0.1 X +0.2 +1.3 compare
mixed community Mixed culture; Pseudomonas DC3000 1:1 with Pseudomonas_SVBP6_ML3 in M9 +0.3 +1.1 compare
supernatant control supernatant control, M9 with 0.1X LB +0.3 +1.3 compare
supernatant Supernatant; Pseudomonas DC3000 grown in LB; 0.5 X +0.3 +1.6 compare