Fitness data for IAI47_02590 in Pantoea sp. MT58

RNA chaperone Hfq
SEED: RNA-binding protein Hfq
KEGG: host factor-I protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.5 -8.2 compare
carbon source Ying_all64 rep A; time point 1 -2.1 -7.0 compare
carbon source Ying_all64 rep A; time point 2 -2.0 -6.9 compare
carbon source Ying_all64 rep C; time point 1 -1.8 -6.6 compare
carbon source Ying_all64 rep B; time point 3 -1.8 -5.8 compare
carbon source Ying_all64 rep C; time point 2 -1.7 -6.1 compare
carbon source Ying_all64 rep B; time point 2 -1.5 -4.4 compare
nitrogen source nitrogen source nitrite 1mM -1.5 -4.8 compare
carbon source Ying_sugar7 rep C; time point 2 -1.4 -4.1 compare
carbon source Ying_all64 rep B; time point 1 -1.4 -5.2 compare
carbon source Ying_all64 rep A; time point 3 -1.4 -5.2 compare
carbon source Ying_sugar7 rep A; time point 3 -1.2 -3.9 compare
carbon source Ying_sugar7 rep B; time point 3 -1.2 -4.9 compare
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.2 -4.4 compare
carbon source Ying_AminoAcid20 rep A; time point 1 -1.1 -4.1 compare
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.1 -5.3 compare
carbon source Ying_Others16 rep A; time point 2 -1.1 -4.1 compare
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.2 +3.5 compare
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +1.2 +5.1 compare
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +1.5 +3.3 compare