Fitness data for HSERO_RS23995 in Herbaspirillum seropedicae SmR1

amino acid ABC transporter ATP-binding protein
SEED: Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -2.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.8 -2.7 compare
carbon source D-Galactose (C) -0.8 -2.2 compare
carbon source Carbon source D-Glucose 20 mM -0.7 -3.1 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.6 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.5 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.4 compare
carbon source succinate (C) +0.5 +2.2 compare
carbon source D-Glucose-6-Phosphate (C) +0.5 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.3 compare
carbon source Xylitol (C) +0.5 +1.4 compare
carbon source D-Lactate (C) +0.6 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +1.8 compare
carbon source D-Glucose-6-Phosphate (C) +0.6 +1.9 compare
carbon source Xylitol (C) +0.6 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +3.2 compare
carbon source m-Inositol (C) +0.7 +2.6 compare
vitamin No vitamins t2 +0.7 +2.1 compare
carbon source Glycerol (C) +0.8 +2.5 compare
carbon source m-Inositol (C) +0.9 +3.1 compare