Fitness data for HSERO_RS23925 in Herbaspirillum seropedicae SmR1

multidrug ABC transporter ATP-binding protein
SEED: Lipid A export ATP-binding/permease protein MsbA
KEGG: ATP-binding cassette, subfamily B, bacterial

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress Nickel (II) chloride 0.6 mM -1.3 -6.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -3.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.4 -1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -1.5 compare
plant Control soil assay; outgrowth in LB -0.4 -1.4 compare
carbon source L-Glutamine (C) -0.3 -1.8 compare
carbon source a-Ketoglutaric (C) -0.3 -1.7 compare
carbon source L-mannose (C) +0.3 +2.1 compare
nitrogen source L-Glutamic (N); low aeration +0.3 +2.5 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 +0.4 +2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.5 +2.8 compare
control NoPredeControl +0.6 +3.2 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.6 +3.5 compare