Fitness data for HSERO_RS23885 in Herbaspirillum seropedicae SmR1

XRE family transcriptional regulator
KEGG: LysR family transcriptional regulator, glycine cleavage system transcriptional activator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
carbon source L-Fucose (C) +0.6 +2.5 compare
carbon source L-Rhamnose (C) +0.6 +2.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +2.1 compare
carbon source L-Lactate (C) +0.7 +2.8 compare
carbon source D-Glucose (C) +0.8 +2.2 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days +0.8 +5.1 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days +0.8 +3.8 compare
vitamin With vitamins t2 +0.8 +3.5 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days +0.8 +6.7 compare
vitamin No vitamins t2 +0.8 +4.5 compare
carbon source D-Lactate (C) +0.8 +2.9 compare
carbon source L-Proline (C) +0.8 +4.5 compare
carbon source L-Proline (C) +1.0 +4.6 compare
carbon source D,L-Lactate (C) +1.2 +7.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.4 +4.8 compare
carbon source D,L-Lactate (C) +1.5 +9.1 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +1.6 +13.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +2.3 +4.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +2.4 +1.9 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +2.4 +17.6 compare