Fitness data for HSERO_RS23565 in Herbaspirillum seropedicae SmR1

sugar ABC transporter substrate-binding protein
SEED: extracellular solute-binding protein, family 1

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
plant Control soil assay; outgrowth in LB -0.7 -3.4 compare
carbon source L-Fucose (C) -0.4 -2.4 compare
carbon source L-Fucose (C) -0.4 -2.3 compare
carbon source D-Glucose (C) -0.4 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.9 compare
carbon source D-Glucose (C) -0.3 -1.6 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.3 -1.9 compare
control NoPredeControl -0.3 -1.8 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 -0.3 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.2 compare
stress Sisomicin 0.125 mg/ml +0.3 +1.2 compare
carbon source m-Inositol (C) +0.3 +1.6 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.3 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.7 compare
control NoPredeControl +0.5 +2.3 compare