Fitness data for HSERO_RS23435 in Herbaspirillum seropedicae SmR1

MerR family transcriptional regulator
SEED: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.4)


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group condition fitness t score  
carbon source L-Fucose (C) -4.5 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -4.5 -2.0 compare
carbon source L-Glutamine (C) -2.8 -3.4 compare
carbon source L-Lactate (C) -2.7 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.6 -2.3 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -2.2 -2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.1 -1.4 compare
carbon source pyruvate (C) -2.0 -2.1 compare
carbon source D-Xylose (C) -2.0 -1.4 compare
carbon source Xylitol (C) -1.8 -1.0 compare
carbon source m-Inositol (C) -1.8 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.8 -1.7 compare
carbon source L-Arabinose (C) -1.6 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.6 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -1.6 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -1.5 -2.1 compare
carbon source D,L-Lactate (C) -1.4 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -1.4 -2.3 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +1.5 +1.0 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +2.0 +1.5 compare