Fitness data for HSERO_RS23345 in Herbaspirillum seropedicae SmR1

16S rRNA methyltransferase
SEED: rRNA small subunit methyltransferase I

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
stress Sisomicin 0.125 mg/ml -1.2 -3.2 compare
stress Cisplatin 0.003 mg/ml -1.0 -3.1 compare
stress Cobalt chloride 0.2 mM -0.9 -3.3 compare
carbon source L-Lactate (C) -0.8 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.8 -2.7 compare
stress Thallium(I) acetate 0.001 mg/ml -0.8 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.7 -3.6 compare
stress nitrate 200 mM -0.7 -3.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.7 -2.8 compare
stress sodium fluoride 100 mM -0.7 -2.1 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.6 +4.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +2.1 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.8 +3.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.9 +3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 +2.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.0 +3.7 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +1.0 +6.0 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +1.1 +3.7 compare