Fitness data for HSERO_RS23290 in Herbaspirillum seropedicae SmR1

taurine dioxygenase
SEED: Putative alkylsulfatase (EC 1.14.11.17)
KEGG: taurine dioxygenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress Sisomicin 0.125 mg/ml -0.6 -2.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.5 -1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -2.2 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.5 -3.4 compare
carbon source L-Arabinose (C) -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.4 compare
carbon source D,L-Malic Acid (C) -0.4 -2.0 compare
carbon source L-Fucose (C) -0.4 -2.2 compare
carbon source D,L-Malic Acid (C) -0.4 -1.5 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.4 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.2 compare
nitrogen source L-Glutamic (N); low aeration -0.3 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.9 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.3 compare
carbon source D-Glucose (C) +0.5 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.8 +1.3 compare