Fitness data for HSERO_RS23235 in Herbaspirillum seropedicae SmR1

GntR family transcriptional regulator
SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
carbon source m-Inositol (C) -1.1 -6.4 compare
carbon source m-Inositol (C) -0.9 -4.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.6 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -2.1 compare
carbon source L-Rhamnose (C) -0.6 -2.2 compare
carbon source Glycerol (C) -0.5 -1.9 compare
vitamin With vitamins t1 -0.5 -2.2 compare
carbon source L-Proline (C) -0.4 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.4 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -2.0 compare
vitamin No vitamins t2 -0.4 -1.6 compare
stress nitrite 20 mM -0.4 -1.7 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.4 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +0.7 compare
carbon source D-Mannose (C) +0.4 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.8 +2.0 compare