Fitness data for HSERO_RS23010 in Herbaspirillum seropedicae SmR1

D-galacturonate transporter ExuT (from data)
Original annotation: hexuronate transporter
SEED: Hexuronate transporter
KEGG: MFS transporter, ACS family, hexuronate transporter

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Galacturonic Acid (C) -3.9 -12.6 compare
carbon source D-Galacturonic Acid (C) -3.8 -12.6 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.6 -2.8 compare
carbon source L-Fucose (C) -0.4 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.5 compare
carbon source succinate (C) -0.4 -2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.4 -1.2 compare
stress A22 0.02 mg/ml -0.4 -2.0 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.4 -1.5 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.8 compare
carbon source D-Glucose-6-Phosphate (C) -0.3 -1.6 compare
carbon source D,L-Lactate (C) -0.3 -1.3 compare
nutrient Min media with glucose +0.3 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.5 compare