Fitness data for HSERO_RS22970 in Herbaspirillum seropedicae SmR1

membrane protein
SEED: UPF0141 membrane protein YijP possibly required for phosphoethanolamine modification of lipopolysaccharide

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
supernatant control Vogels_fungal_media; pH 5.5 -0.6 -3.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.5 -2.2 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.7 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.4 -1.7 compare
vitamin With vitamins t1 -0.4 -2.1 compare
stress A22 0.04 mg/ml -0.4 -2.2 compare
carbon source D-Glucose-6-Phosphate (C) +0.4 +1.6 compare
carbon source succinate (C) +0.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.9 compare
carbon source L-Lactate (C) +0.4 +1.8 compare
carbon source D-Lactate (C) +0.4 +1.5 compare
carbon source D-Ribose (C) +0.4 +1.7 compare
carbon source D-Mannose (C) +0.5 +2.8 compare
carbon source D-Galacturonic Acid (C) +0.5 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.2 compare
carbon source L-Arabinose (C) +0.5 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.6 compare
carbon source D-Glucose (C) +0.6 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +1.6 compare
carbon source D,L-Lactate (C) +0.7 +3.1 compare