Fitness data for HSERO_RS22945 in Herbaspirillum seropedicae SmR1

thiophene oxidase
SEED: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.2 compare
stress Lomefloxacin 0.012 mM -0.5 -1.2 compare
stress Sisomicin 0.125 mg/ml -0.4 -1.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.3 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.3 -1.7 compare
carbon source D-Gluconic Acid (C) -0.3 -1.3 compare
plant Control soil assay; outgrowth in LB -0.3 -1.1 compare
carbon source L-mannose (C) +0.3 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +0.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +2.3 compare
stress Cobalt chloride 0.2 mM +0.3 +1.6 compare
carbon source L-Proline (C) +0.4 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.2 compare
stress Fusidic 0.025 mg/ml +0.5 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.5 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +0.9 compare