Fitness data for HSERO_RS22840 in Herbaspirillum seropedicae SmR1

ornithine cyclodeaminase
SEED: Ornithine cyclodeaminase (EC 4.3.1.12)
KEGG: ornithine cyclodeaminase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
control NoPredeControl -0.6 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.8 compare
nutrient L-Serine -0.4 -2.2 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 -0.4 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.0 compare
nutrient casaminos -0.3 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.4 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.3 -1.6 compare
carbon source D-Glucose (C) +0.3 +1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.3 +1.4 compare
plant Control soil assay; outgrowth in LB +0.3 +1.3 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.3 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.3 compare
carbon source L-Fucose (C) +0.6 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.4 +1.5 compare