Fitness data for HSERO_RS22785 in Herbaspirillum seropedicae SmR1

Type I site-specific deoxyribonuclease specificity subunit
SEED: Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)
KEGG: type I restriction enzyme, S subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.4 -3.4 compare
r2a control R2A control -0.4 -3.3 compare
carbon source Xylitol (C) -0.4 -2.9 compare
stress Lomefloxacin 0.012 mM -0.3 -2.3 compare
carbon source D-Sorbitol (C) -0.3 -2.6 compare
carbon source Xylitol (C) -0.3 -2.4 compare
carbon source D-Galactose (C) -0.3 -2.3 compare
carbon source D-Gluconic Acid (C) -0.3 -2.3 compare
carbon source D-Glucose (C) -0.3 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -2.2 compare
carbon source D-Glucose (C) -0.3 -2.0 compare
carbon source L-Asparagine (C) +0.3 +2.3 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.3 +2.4 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +0.3 +2.5 compare
plant Control soil assay; outgrowth in LB +0.3 +2.5 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.3 +3.2 compare
carbon source L-Asparagine (C) +0.4 +3.5 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.5 +4.7 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days +0.5 +4.8 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.5 +5.0 compare