Fitness data for HSERO_RS22770 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator
SEED: Transcriptional activator MetR
KEGG: LysR family transcriptional regulator, regulator for metE and metH

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -2.6 -5.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -2.3 -5.1 compare
nitrogen source L-Proline (N) -1.5 -4.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -1.2 -5.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -1.2 -2.9 compare
stress sodium fluoride 100 mM -0.8 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.9 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.5 -1.4 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.5 -2.3 compare
carbon source pyruvate (C) -0.5 -2.4 compare
carbon source Xylitol (C) -0.4 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.6 compare
carbon source L-Malic (C) -0.4 -1.4 compare
carbon source D-Lactate (C) +0.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.5 compare
plant Control soil assay; outgrowth in LB +0.5 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.5 +2.7 compare
carbon source L-Lactate (C) +0.6 +2.0 compare