Fitness data for HSERO_RS22670 in Herbaspirillum seropedicae SmR1

histidine kinase
SEED: Tricarboxylate transport sensor protein TctE
KEGG: two-component system, OmpR family, sensor histidine kinase TctE

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
micoeukaryotes C.elegans, mixed culture-2 -0.9 -2.7 compare
control NoPredeControl -0.8 -1.7 compare
carbon source Glycerol (C) -0.7 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.7 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 -0.7 -3.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -1.4 compare
carbon source Xylitol (C) -0.5 -1.0 compare
stress Fusidic 0.025 mg/ml -0.5 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.5 compare
carbon source L-Lactate (C) +0.5 +2.0 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.5 +2.2 compare
carbon source L-Arabinose (C) +0.5 +1.4 compare
carbon source D-Sorbitol (C) +0.5 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.5 +1.9 compare
stress Sisomicin 0.125 mg/ml +0.5 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.6 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.6 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.2 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.7 +3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.0 +2.8 compare