Fitness data for HSERO_RS22660 in Herbaspirillum seropedicae SmR1

tricarboxylate transporter
SEED: Tricarboxylate transport protein TctC
KEGG: putative tricarboxylic transport membrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source D-Glucose (C) -1.1 -2.8 compare
carbon source Glycerol (C) -1.0 -3.4 compare
carbon source L-Fucose (C) -0.9 -2.2 compare
stress Lomefloxacin 0.012 mM -0.8 -1.5 compare
carbon source L-Lactate (C) -0.7 -3.6 compare
stress A22 0.04 mg/ml -0.6 -2.3 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.6 -2.0 compare
carbon source m-Inositol (C) -0.5 -2.0 compare
micoeukaryotes C.elegans, mixed culture-2 -0.5 -1.8 compare
nitrogen source L-Proline (N) -0.5 -2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.9 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.5 +2.2 compare
r2a control R2A control +0.5 +1.8 compare
carbon source D-Lactate (C) +0.5 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.5 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.2 compare
carbon source Xylitol (C) +0.6 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.5 compare