Fitness data for HSERO_RS22625 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator
SEED: LysR family transcriptional regulator PA2758

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
carbon source D-Glucose-6-Phosphate (C) -2.6 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.4 -1.8 compare
stress Cobalt chloride 0.2 mM -1.4 -1.3 compare
carbon source D,L-Lactate (C) -1.3 -1.9 compare
carbon source D-Xylose (C) -1.3 -1.3 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -1.2 -2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.2 -1.6 compare
stress Sisomicin 0.125 mg/ml -1.2 -1.2 compare
carbon source D-Xylose (C) -1.1 -2.6 compare
nitrogen source Ammonium chloride (N); high aeration -1.1 -2.2 compare
stress nitrite 20 mM -1.1 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +1.5 compare
vitamin No vitamins t1 +1.1 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +1.1 +2.2 compare
supernatant control Vogels_fungal_media 0.1X +1.1 +2.5 compare
agar plate interaction control Taped volatile agar plate with no fungus +1.2 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.3 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.3 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +3.3 +1.2 compare