Fitness data for HSERO_RS22495 in Herbaspirillum seropedicae SmR1

D-alanyl-D-alanine carboxypeptidase
SEED: Murein-DD-endopeptidase (EC 3.4.99.-)
KEGG: D-alanyl-D-alanine endopeptidase (penicillin-binding protein 7)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Galactose (C) -1.0 -4.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -3.1 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.9 -3.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -2.0 compare
carbon source D-Galactose (C) -0.6 -2.9 compare
carbon source Xylitol (C) -0.6 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -2.7 compare
plant Control soil assay; outgrowth in LB -0.6 -1.4 compare
stress nitrate 200 mM -0.6 -1.7 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.6 -1.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.5 -2.5 compare
carbon source L-Arabinose (C) -0.5 -1.6 compare
stress Cisplatin 0.003 mg/ml -0.5 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.4 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.5 +1.8 compare
micoeukaryotes C.elegans, mixed culture-1 +0.5 +1.8 compare
control NoPredeControl +0.6 +1.7 compare