Fitness data for HSERO_RS22430 in Herbaspirillum seropedicae SmR1

TonB-dependent receptor
SEED: Outer membrane receptor proteins, mostly Fe transport
KEGG: iron complex outermembrane recepter protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source L-Arabinose (C) -1.1 -2.8 compare
carbon source Glycerol (C) -0.8 -2.7 compare
carbon source D-Ribose (C) -0.6 -2.2 compare
carbon source D-Glucose (C) -0.6 -2.0 compare
carbon source L-Rhamnose (C) -0.6 -1.6 compare
stress Lomefloxacin 0.012 mM -0.5 -1.1 compare
carbon source L-Glutamine (C) -0.5 -1.7 compare
carbon source L-Arabinose (C) -0.4 -1.4 compare
carbon source L-Fucose (C) -0.4 -1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.4 -2.4 compare
carbon source m-Inositol (C) -0.4 -1.7 compare
carbon source D-Gluconic Acid (C) -0.4 -1.3 compare
carbon source L-Malic (C) -0.4 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.4 -1.6 compare
stress sodium fluoride 100 mM +0.4 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.9 compare
nutrient L-Histidine +0.5 +2.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.4 compare