Fitness data for HSERO_RS22395 in Herbaspirillum seropedicae SmR1

RNA polymerase sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source a-Ketoglutaric (C) -0.9 -2.9 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.8 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -1.7 compare
carbon source L-Lactate (C) -0.6 -1.7 compare
carbon source D-Ribose (C) -0.6 -1.8 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.6 -2.1 compare
carbon source succinate (C) -0.6 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.6 -1.6 compare
stress nitrate 200 mM -0.6 -1.4 compare
plant Control soil assay; outgrowth in LB +0.5 +1.6 compare
stress Chloride stress +0.5 +2.0 compare
stress sodium fluoride 100 mM +0.5 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.3 compare
vitamin With vitamins t1 +0.6 +2.0 compare
stress nitrite 20 mM +0.7 +1.9 compare
vitamin With vitamins t2 +0.7 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.9 +2.5 compare