Fitness data for HSERO_RS22350 in Herbaspirillum seropedicae SmR1

urea carboxylase
SEED: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
KEGG: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -5.2 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -3.7 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -1.9 -1.6 compare
carbon source L-Fucose (C) -1.8 -1.2 compare
nitrogen source L-Glutamic (N); low aeration -1.7 -2.0 compare
nitrogen source nitrate (N); high aeration -1.4 -1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.4 -0.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.4 -1.0 compare
carbon source L-Malic (C) +1.4 +1.5 compare
stress Dimethyl Sulfoxide 5 vol% +1.4 +1.8 compare
stress Fusidic 0.025 mg/ml +1.4 +1.3 compare
nitrogen source L-Proline (N) +1.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.6 +2.6 compare
stress nitrate 200 mM +1.7 +2.0 compare
carbon source L-Asparagine (C) +1.7 +2.3 compare
stress A22 0.02 mg/ml +1.8 +2.4 compare
carbon source L-Proline (C) +1.9 +2.6 compare
stress sodium fluoride 100 mM +2.2 +2.5 compare
stress Lomefloxacin 0.012 mM +2.2 +2.3 compare
stress Sisomicin 0.125 mg/ml +2.4 +2.4 compare