Fitness data for HSERO_RS22245 in Herbaspirillum seropedicae SmR1

2-pyrone-4,6-dicarboxylate hydrolase
SEED: putative 2-pyrone-4,6-dicarboxylic acid hydrolase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
micoeukaryotes Dictyostellum sp.mixed culture-2 -0.4 -2.3 compare
micoeukaryotes C.elegans, mixed culture-2 -0.4 -1.4 compare
stress A22 0.04 mg/ml -0.4 -1.6 compare
plant Control soil assay; outgrowth in LB -0.3 -1.5 compare
carbon source Carbon source D-Glucose 20 mM -0.3 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.3 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 -1.2 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.3 -1.6 compare
carbon source D-Galactose (C) -0.3 -1.4 compare
carbon source D-Galacturonic Acid (C) -0.3 -1.7 compare
carbon source L-Lactate (C) +0.3 +1.5 compare
carbon source Xylitol (C) +0.3 +1.3 compare
carbon source D-Sorbitol (C) +0.3 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3 +1.3 compare
stress sodium fluoride 100 mM +0.3 +1.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.3 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.7 compare
carbon source L-Arabinose (C) +0.4 +2.0 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.6 +3.8 compare