Fitness data for HSERO_RS22225 in Herbaspirillum seropedicae SmR1

ABC transporter substrate-binding protein
SEED: Predicted L-rhamnose ABC transporter, substrate-binding component
KEGG: rhamnose transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source L-Rhamnose (C) -4.8 -6.3 compare
carbon source L-Rhamnose (C) -4.6 -6.8 compare
carbon source L-Rhamnose (C) -3.0 -4.0 compare
carbon source L-Rhamnose (C) -2.9 -4.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.5 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -1.5 compare
r2a control R2A control -0.4 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.4 compare
r2a control R2A control -0.4 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.1 compare
stress sodium fluoride 100 mM +0.4 +1.0 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.4 +1.8 compare
carbon source Glycerol (C) +0.4 +1.2 compare
carbon source L-Fucose (C) +0.4 +1.8 compare
stress Nickel (II) chloride 0.6 mM +0.4 +1.3 compare
carbon source Xylitol (C) +0.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +0.9 compare