Fitness data for HSERO_RS22210 in Herbaspirillum seropedicae SmR1

branched-chain amino acid ABC transporter permease
SEED: Predicted L-rhamnose ABC transporter, transmembrane component 1
KEGG: rhamnose transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source L-Rhamnose (C) -5.4 -9.7 compare
carbon source L-Rhamnose (C) -4.3 -8.7 compare
carbon source L-Rhamnose (C) -4.1 -6.0 compare
carbon source L-Rhamnose (C) -3.5 -9.0 compare
stress Lomefloxacin 0.012 mM -0.9 -1.9 compare
carbon source D-Ribose (C) -0.9 -3.0 compare
stress Sisomicin 0.125 mg/ml -0.8 -2.1 compare
carbon source D-Glucose-6-Phosphate (C) -0.7 -1.9 compare
carbon source D-Glucose (C) -0.6 -2.2 compare
carbon source Glycerol (C) -0.6 -2.1 compare
carbon source D,L-Lactate (C) -0.5 -2.5 compare
carbon source a-Ketoglutaric (C) -0.5 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.5 compare
control NoPredeControl +0.7 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +1.4 compare