Fitness data for HSERO_RS22180 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator
SEED: Transcriptional regulator, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -2.6 compare
carbon source L-Lactate (C) -0.6 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -1.7 compare
carbon source L-Malic (C) -0.4 -1.6 compare
carbon source D-Ribose (C) -0.4 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -0.9 compare
carbon source D-Galacturonic Acid (C) +0.4 +1.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.4 +1.2 compare
carbon source L-Rhamnose (C) +0.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.2 compare
carbon source Glycerol (C) +0.4 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.5 +2.0 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.5 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +0.7 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.6 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +2.2 compare