Fitness data for HSERO_RS22160 in Herbaspirillum seropedicae SmR1

cation transporter
SEED: Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA
KEGG: heavy-metal exporter, HME family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction control Taped volatile agar plate with no fungus -0.4 -2.1 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.8 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.6 compare
carbon source D,L-Lactate (C) -0.3 -1.7 compare
carbon source L-Rhamnose (C) +0.3 +1.1 compare
stress sodium fluoride 100 mM +0.3 +1.4 compare
carbon source a-Ketoglutaric (C) +0.3 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.9 compare
nitrogen source nitrate (N); high aeration +0.3 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.4 compare
stress A22 0.02 mg/ml +0.3 +2.0 compare
carbon source Xylitol (C) +0.3 +1.8 compare
stress Fusidic 0.025 mg/ml +0.3 +1.6 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.3 +2.0 compare
stress nitrite 20 mM +0.3 +1.9 compare
plant Control soil assay; outgrowth in LB +0.4 +2.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +2.2 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.6 +2.7 compare