Fitness data for HSERO_RS22035 in Herbaspirillum seropedicae SmR1

tRNA 2-thiocytidine biosynthesis protein TtcA
SEED: tRNA(Cytosine32)-2-thiocytidine synthetase
KEGG: tRNA 2-thiocytidine biosynthesis protein TtcA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.6 -3.7 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.4 compare
stress Cobalt chloride 0.2 mM -0.5 -2.3 compare
stress Sisomicin 0.125 mg/ml -0.5 -1.6 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.5 -2.0 compare
nitrogen source L-Proline (N) -0.5 -2.1 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.5 -2.8 compare
carbon source pyruvate (C) -0.5 -2.1 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.4 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.5 compare
stress Lomefloxacin 0.012 mM -0.4 -1.6 compare
stress nitrite 20 mM -0.4 -1.9 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.4 -2.2 compare
carbon source Glycerol (C) -0.3 -1.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.3 -2.0 compare
stress Fusidic 0.025 mg/ml -0.3 -1.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.3 -2.4 compare
control NoPredeControl +0.3 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.3 compare