Fitness data for HSERO_RS22030 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress nitrite 20 mM -0.5 -2.8 compare
stress A22 0.02 mg/ml -0.5 -2.3 compare
vitamin No vitamins t2 -0.3 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.5 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.3 +1.2 compare
carbon source D-Galactose (C) +0.4 +1.3 compare
carbon source L-Rhamnose (C) +0.4 +1.5 compare
carbon source D-Xylose (C) +0.4 +1.5 compare
carbon source Xylitol (C) +0.4 +1.5 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.4 +2.0 compare
carbon source m-Inositol (C) +0.4 +2.3 compare
nutrient casaminos +0.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.4 +2.0 compare
carbon source D-Sorbitol (C) +0.4 +1.9 compare
plant Control soil assay; outgrowth in LB +0.5 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.5 +1.6 compare
carbon source D-Ribose (C) +0.5 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.3 compare