Fitness data for HSERO_RS21920 in Herbaspirillum seropedicae SmR1

iron ABC transporter substrate-binding protein
SEED: Putative periplasmic substrate-binding transport protein
KEGG: iron complex transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
vitamin No vitamins t2 -0.9 -4.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.7 -2.0 compare
plant Control soil assay; outgrowth in LB -0.6 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.6 compare
vitamin With vitamins t1 -0.4 -1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -1.3 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.4 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.4 compare
stress Sisomicin 0.125 mg/ml +0.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.6 compare
carbon source Xylitol (C) +0.4 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.6 compare
carbon source succinate (C) +0.5 +1.9 compare
carbon source L-Lactate (C) +0.5 +2.0 compare
carbon source L-Fucose (C) +0.6 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +2.6 compare
stress sodium fluoride 100 mM +0.7 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.8 compare