Fitness data for HSERO_RS21885 in Herbaspirillum seropedicae SmR1

nuclease PIN
SEED: Iron-uptake factor PiuC
KEGG: PKHD-type hydroxylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.9 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.6 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.0 compare
nutrient Min media with glucose -0.5 -2.1 compare
carbon source Xylitol (C) -0.5 -1.7 compare
carbon source L-Rhamnose (C) -0.5 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.1 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.4 -1.3 compare
carbon source D-Galactose (C) -0.4 -2.0 compare
carbon source m-Inositol (C) +0.4 +1.8 compare
carbon source Xylitol (C) +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +0.8 compare
carbon source L-Arabinose (C) +0.5 +1.3 compare
stress Lomefloxacin 0.012 mM +0.5 +1.3 compare
vitamin With vitamins t1 +0.5 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.5 +1.5 compare
carbon source D-Xylose (C) +0.6 +2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.1 compare