Fitness data for HSERO_RS21870 in Herbaspirillum seropedicae SmR1

amidase
SEED: putative amidase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
supernatant control Vogels_fungal_media; pH 5.5 -0.6 -1.3 compare
carbon source D-Galacturonic Acid (C) -0.6 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.5 -1.0 compare
control NoPredeControl -0.5 -1.8 compare
nutrient L-Serine -0.5 -2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -1.7 compare
carbon source Glycerol (C) -0.5 -1.5 compare
nitrogen source L-Glutamic (N); high aeration -0.5 -1.4 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.4 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.0 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.4 -1.4 compare
carbon source L-Fucose (C) +0.4 +1.5 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.5 +2.0 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.1 compare
carbon source D-Xylose (C) +0.6 +1.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.8 +1.3 compare
control NoPredeControl +1.0 +2.5 compare