Fitness data for HSERO_RS21785 in Herbaspirillum seropedicae SmR1

arogenate dehydratase
SEED: Cyclohexadienyl dehydratase (EC 4.2.1.51)(EC 4.2.1.91)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Xylitol (C) -0.7 -2.1 compare
carbon source L-Rhamnose (C) -0.6 -2.0 compare
carbon source L-Rhamnose (C) -0.5 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.5 -3.0 compare
carbon source D-Lactate (C) -0.5 -2.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.5 -1.6 compare
carbon source D-Mannose (C) -0.4 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.9 compare
nitrogen source Ammonium chloride (N); low aeration +0.4 +2.6 compare
carbon source L-Rhamnose (C) +0.4 +2.4 compare
carbon source D-Mannitol (C) +0.5 +2.7 compare
carbon source D,L-Malic Acid (C) +0.5 +2.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +2.6 compare
carbon source D-Glucose (C) +0.5 +2.0 compare
plant Control soil assay; outgrowth in LB +0.6 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +4.0 compare
plant Control soil assay; outgrowth in LB +0.7 +3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.8 +2.9 compare