Fitness data for HSERO_RS21620 in Herbaspirillum seropedicae SmR1

amino acid ABC transporter permease
SEED: Amino acid ABC transporter, permease protein
KEGG: polar amino acid transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
plant Control soil assay; outgrowth in LB -1.3 -3.1 compare
carbon source L-Fucose (C) -0.7 -3.8 compare
carbon source L-Fucose (C) -0.6 -2.9 compare
nitrogen source Ammonium chloride (N); low aeration -0.6 -2.2 compare
carbon source D-Gluconic Acid (C) -0.6 -1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -1.7 compare
stress Fusidic 0.025 mg/ml +0.6 +2.3 compare
carbon source Xylitol (C) +0.6 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +2.9 compare
stress Nickel (II) chloride 0.6 mM +0.8 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.2 compare
stress Thallium(I) acetate 0.001 mg/ml +0.8 +3.3 compare
stress Cobalt chloride 0.2 mM +1.0 +4.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.0 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.1 +1.4 compare
stress nitrate 200 mM +1.1 +4.7 compare
stress sodium fluoride 100 mM +1.4 +3.8 compare