Fitness data for HSERO_RS21485 in Herbaspirillum seropedicae SmR1

phosphoglycolate phosphatase
SEED: Phosphoglycolate phosphatase (EC 3.1.3.18)
KEGG: putative hydrolase of the HAD superfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -1.2 -4.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -1.7 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -0.6 -3.8 compare
carbon source D,L-Lactate (C) -0.6 -1.9 compare
carbon source L-Rhamnose (C) -0.5 -3.1 compare
carbon source Glycerol (C) -0.5 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.4 compare
carbon source D-Glucose (C) -0.5 -1.9 compare
carbon source L-mannose (C) -0.5 -2.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -1.7 compare
nitrogen source nitrate (N); high aeration -0.4 -2.1 compare
carbon source L-Arabinose (C) -0.4 -1.5 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.4 -1.8 compare
carbon source L-Proline (C) +0.5 +1.8 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days +0.6 +3.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.6 compare
vitamin With vitamins t2 +0.7 +2.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +3.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.9 compare