Fitness data for HSERO_RS21430 in Herbaspirillum seropedicae SmR1

membrane protein
SEED: FIG028593: membrane protein
KEGG: putative membrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source D-Galactose (C) -1.4 -2.4 compare
carbon source L-Lactate (C) -1.0 -2.5 compare
carbon source D-Gluconic Acid (C) -0.9 -2.5 compare
carbon source succinate (C) -0.9 -1.9 compare
vitamin No vitamins t1 -0.8 -2.5 compare
carbon source D-Gluconic Acid (C) -0.8 -2.2 compare
plant Control soil assay; outgrowth in LB -0.8 -2.7 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.8 -1.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -2.0 compare
vitamin No vitamins t2 -0.7 -2.1 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -0.7 -1.6 compare
carbon source L-Fucose (C) -0.7 -1.6 compare
carbon source L-Proline (C) -0.7 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +1.1 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.7 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +2.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.7 +3.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.7 compare