Fitness data for HSERO_RS21250 in Herbaspirillum seropedicae SmR1

amino acid ABC transporter ATP-binding protein
SEED: Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1)
KEGG: polar amino acid transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
carbon source L-Fucose (C) -0.6 -2.2 compare
stress nitrite 20 mM -0.6 -2.4 compare
carbon source L-Fucose (C) -0.6 -1.4 compare
nutrient casaminos -0.6 -2.2 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.5 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +0.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X +0.5 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +2.0 compare
carbon source D-Glucose-6-Phosphate (C) +0.6 +3.0 compare
vitamin With vitamins t2 +0.6 +3.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.6 +1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.9 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 +2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.3 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.4 +1.1 compare