Fitness data for HSERO_RS21165 in Herbaspirillum seropedicae SmR1

GntR family transcriptional regulator
SEED: Transcriptional regulator PhnF

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress Cobalt chloride 0.2 mM -0.9 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.9 -3.1 compare
plant Control soil assay; outgrowth in LB -0.7 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -1.7 compare
stress Sisomicin 0.125 mg/ml -0.6 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -2.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.5 -2.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.5 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.5 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.4 compare
carbon source succinate (C) +0.5 +2.7 compare
carbon source D-Glucose (C) +0.5 +1.2 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.6 +1.1 compare
carbon source L-Arabinose (C) +0.6 +1.9 compare
carbon source L-Lactate (C) +0.7 +2.8 compare
carbon source D,L-Lactate (C) +0.7 +2.2 compare
carbon source D,L-Lactate (C) +0.8 +2.6 compare
carbon source L-Lactate (C) +0.8 +3.5 compare
carbon source m-Inositol (C) +1.0 +3.1 compare