Fitness data for HSERO_RS21160 in Herbaspirillum seropedicae SmR1

3-hydroxyisobutyrate dehydrogenase
SEED: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
KEGG: 3-hydroxyisobutyrate dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source L-Lactate (C) -0.6 -1.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -1.6 compare
carbon source D-Xylose (C) +0.5 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.5 +1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.4 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.5 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.8 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.5 +1.9 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.5 +1.9 compare
stress Thallium(I) acetate 0.001 mg/ml +0.5 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +0.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.6 +1.9 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.6 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.8 compare
stress Cobalt chloride 0.2 mM +0.7 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.1 +1.8 compare