Fitness data for HSERO_RS20900 in Herbaspirillum seropedicae SmR1

type IV pilus biogenesis protein
KEGG: type IV pilus assembly protein PilN

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
control NoPredeControl -1.6 -2.5 compare
supernatant control Vogels_fungal_media; pH 5.5 -1.2 -2.0 compare
carbon source D-Glucose-6-Phosphate (C) -0.9 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -1.6 compare
supernatant control Vogels_fungal_media 0.1X -0.7 -2.4 compare
micoeukaryotes C.elegans, mixed culture-2 -0.7 -1.9 compare
carbon source D-Lactate (C) -0.7 -2.5 compare
carbon source pyruvate (C) -0.7 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.6 -1.3 compare
stress Nickel (II) chloride 0.6 mM -0.6 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.6 -1.6 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.6 -1.9 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.6 -1.5 compare
carbon source Glycerol (C) -0.6 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.5 compare
nitrogen source nitrate (N); low aeration +0.7 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +2.2 compare
carbon source L-mannose (C) +0.7 +2.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.9 +2.2 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +0.9 +3.4 compare