Fitness data for HSERO_RS20810 in Herbaspirillum seropedicae SmR1

amidophosphoribosyltransferase
SEED: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source D-Xylose (C) -1.1 -3.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.8 -1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.7 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.8 compare
carbon source D-Mannose (C) -0.7 -2.1 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.7 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.6 -2.9 compare
carbon source D-Galactose (C) -0.6 -1.3 compare
carbon source D-Galactose (C) -0.6 -1.2 compare
carbon source Glycerol (C) -0.6 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.6 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +0.9 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.7 +3.2 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.7 +2.4 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.9 +4.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1 +1.2 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +2.5 +12.9 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +2.7 +16.9 compare