Fitness data for HSERO_RS20790 in Herbaspirillum seropedicae SmR1

cytochrome B559 subunit alpha
SEED: Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
KEGG: cytochrome c oxidase subunit II

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.7 -4.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.7 -4.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.7 -3.6 compare
carbon source D-Mannose (C) -1.5 -5.2 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -1.5 -5.0 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -1.4 -6.6 compare
carbon source D-Ribose (C) -1.4 -3.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.3 -3.9 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -1.2 -4.1 compare
carbon source D-Mannose (C) -1.2 -2.9 compare
carbon source D-Ribose (C) -1.2 -2.9 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -1.0 -4.8 compare
stress Sisomicin 0.125 mg/ml -0.8 -2.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.8 -1.5 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -0.7 -3.0 compare
carbon source D-Glucose-6-Phosphate (C) -0.7 -2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +1.5 compare