Fitness data for HSERO_RS20780 in Herbaspirillum seropedicae SmR1

cytochrome C oxidase assembly protein
SEED: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
KEGG: cytochrome c oxidase subunit XI assembly protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -1.5 -4.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.5 -3.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.5 -2.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.4 -2.8 compare
carbon source D-Ribose (C) -1.3 -2.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.3 -2.5 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -1.2 -3.8 compare
carbon source D-Mannose (C) -1.2 -3.0 compare
carbon source Glycerol (C) -1.0 -2.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.0 -1.5 compare
carbon source D-Mannose (C) -1.0 -4.2 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -1.0 -2.1 compare
carbon source Xylitol (C) -1.0 -2.6 compare
carbon source D-Galactose (C) -1.0 -2.5 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -1.0 -3.2 compare
carbon source Xylitol (C) -1.0 -2.8 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.8 -2.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.8 -1.8 compare
stress Thallium(I) acetate 0.001 mg/ml -0.8 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.0 +1.8 compare