Fitness data for HSERO_RS20595 in Herbaspirillum seropedicae SmR1

branched-chain amino acid ABC transporter substrate-binding protein
SEED: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
KEGG: branched-chain amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source Carbon source Phenylacetic 5 mM -1.8 -6.3 compare
carbon source Carbon source Phenylacetic 5 mM -1.2 -3.2 compare
carbon source D-Gluconic Acid (C) -0.9 -2.3 compare
control NoPredeControl -0.8 -1.0 compare
nutrient L-Histidine -0.7 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.7 -1.2 compare
carbon source L-Arabinose (C) -0.7 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -1.6 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.6 -1.9 compare
carbon source L-Lactate (C) -0.6 -1.6 compare
carbon source D-Galactose (C) -0.6 -2.4 compare
stress Fusidic 0.025 mg/ml -0.5 -1.3 compare
carbon source D-Xylose (C) -0.5 -1.5 compare
vitamin No vitamins t1 -0.5 -1.5 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.5 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +2.1 compare
stress Cobalt chloride 0.2 mM +0.6 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +0.7 +2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +2.0 +1.7 compare