Fitness data for HSERO_RS20535 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator
SEED: transcriptional regulator, MerR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.6 compare
stress Cobalt chloride 0.2 mM -0.5 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.5 -1.4 compare
carbon source D-Gluconic Acid (C) +0.5 +1.6 compare
carbon source L-Rhamnose (C) +0.5 +1.4 compare
carbon source D-Mannitol (C) +0.5 +2.6 compare
carbon source succinate (C) +0.5 +1.8 compare
plant Control soil assay; outgrowth in LB +0.5 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.9 compare
nutrient Min media with glucose +0.5 +3.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.5 +3.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.9 compare
carbon source L-Lactate (C) +0.5 +1.7 compare
carbon source D-Xylose (C) +0.5 +2.3 compare
carbon source D,L-Lactate (C) +0.5 +2.0 compare
carbon source L-Glutamine (C) +0.6 +1.8 compare
carbon source pyruvate (C) +0.6 +1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1 +1.4 compare