Fitness data for HSERO_RS20405 in Herbaspirillum seropedicae SmR1

GTP-binding protein YchF
SEED: GTP-binding and nucleic acid-binding protein YchF

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -2.0 -3.0 compare
carbon source Xylitol (C) -2.0 -3.2 compare
stress nitrate 200 mM -1.8 -3.5 compare
supernatant control Vogels_fungal_media; pH 5.5 -1.7 -3.0 compare
carbon source L-Glutamine (C) -1.6 -5.3 compare
carbon source L-Asparagine (C) -1.6 -5.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.6 -3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.5 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.5 -3.6 compare
carbon source D-Gluconic Acid (C) -1.4 -2.5 compare
carbon source m-Inositol (C) -1.3 -3.1 compare
stress A22 0.02 mg/ml -1.3 -5.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.3 -3.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -1.3 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.3 -2.9 compare
carbon source D-Gluconic Acid (C) -1.2 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 -2.0 compare
carbon source D-Glucose-6-Phosphate (C) -1.1 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.8 +1.3 compare